DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen and dlx2a

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571386.2 Gene:dlx2a / 30574 ZFINID:ZDB-GENE-980526-212 Length:274 Species:Danio rerio


Alignment Length:303 Identity:70/303 - (23%)
Similarity:113/303 - (37%) Gaps:98/303 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVMH--------YYPVHQAKVG-----SYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNS 52
            :|:.||        |:.:|:::..     |.:.|.|        |.::::....|.|  |.|::|
Zfish    11 LSTDMHSNQITSSSYHSLHKSQESPTLPVSTATDSS--------YYNNNNQQCAGSP--YGQISS 65

  Fly    53 NPTTLNDHCSPQHVHQQH------------------------VSSDENLPSQPNHDSQRVKLKRS 93
            .....|...|.|:..:.:                        ...:|:.|.....:.:..|:::.
Zfish    66 YQYQNNSMNSVQYNTKSYELGFGNAFGPYGTYGSCSSPTPADAEKEESEPEIRMVNGKPKKVRKP 130

  Fly    94 RTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSN 158
            ||.::|.||..|:..|:...||....|.|:|..|.|.:.||||||||||.||||           
Zfish   131 RTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKK----------- 184

  Fly   159 AKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQKMKTEASTNN 223
                               |....:.|.|...|:.:.|.....|:....|:..||:|.|   .|:
Zfish   185 -------------------LWKSGEIPPEQHVASSESPPHPSPPLAAAWDFAHSQRMNT---VNS 227

  Fly   224 GMCSSADLSEILEHLAQTTAAPQVSTATSSTG----TSTNSAS 262
            |:..|              :.|..:|.:..|.    :|||||:
Zfish   228 GLSQS--------------SPPNTTTPSFLTNYPWYSSTNSAA 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 26/55 (47%)
dlx2aNP_571386.2 DLL_N 32..107 CDD:463567 12/84 (14%)
Homeodomain 128..184 CDD:459649 26/55 (47%)

Return to query results.
Submit another query.