DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and emx2

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571355.2 Gene:emx2 / 30537 ZFINID:ZDB-GENE-990415-54 Length:247 Species:Danio rerio


Alignment Length:197 Identity:58/197 - (29%)
Similarity:90/197 - (45%) Gaps:28/197 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HQAKVGSYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNSNPTTLNDHCSPQHVHQQHVSS-- 73
            |.:..|.|| :|..| :::.:....:...|:...|..:.:.::|.:.:....|....||...|  
Zfish    52 HSSGRGVYS-NPGLV-FAEAVSHPPNSAVPVHSVPPPHALAAHPLSSSHSPHPLFASQQRDPSTF 114

  Fly    74 -----------------DENLP-SQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRR 120
                             :|..| |...|::...|.||.||||:..||:.||:.|:.|.|:....|
Zfish   115 YPWLIHRYRYLGHRFQGNETSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAER 179

  Fly   121 IEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDP 185
            .::|..|||.|.|||:||||||.|||:  |...|..|:::    |.::..|.....||.:....|
Zfish   180 KQLAHSLSLTETQVKVWFQNRRTKFKR--QKLEEEGSDSQ----QKKKGTHHINRWRLATKQGSP 238

  Fly   186 RE 187
            .|
Zfish   239 EE 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 30/55 (55%)
emx2NP_571355.2 Homeodomain 150..206 CDD:459649 30/55 (55%)

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