DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and msx1b

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571335.1 Gene:msx1b / 30511 ZFINID:ZDB-GENE-980526-26 Length:257 Species:Danio rerio


Alignment Length:106 Identity:39/106 - (36%)
Similarity:55/106 - (51%) Gaps:8/106 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 MNSNPTTLNDHCSPQHVHQQHV-SSDENLPSQPNHDS------QRVKLKRS-RTAFTSVQLVELE 106
            ::|...:|||........:|.. |:..:..|.|.|.|      ::.|..|. ||.|::.||:.||
Zfish    91 LSSVSDSLNDDSEELSDKEQSTWSNSSSFTSPPRHPSPTPCTLRKHKTNRKPRTPFSTSQLLSLE 155

  Fly   107 NEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147
            .:|:...||....|.|.:..|:|.|.||||||||||.|.|:
Zfish   156 RKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKR 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 27/56 (48%)
msx1bNP_571335.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 14/54 (26%)
Homeodomain 140..196 CDD:459649 27/55 (49%)
Blue background indicates that the domain is not in the aligned region.

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