DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxb8b

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:133 Identity:47/133 - (35%)
Similarity:68/133 - (51%) Gaps:32/133 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP 155
            :|.|..::..|.:|||.||..|.||.|.||||::..|:|.||||||||||||||:||:....:.|
Zfish   146 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEHNKDKFP 210

  Fly   156 KSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQKMKTEAS 220
            .|.|:..:.:.|:                 :||:..:||               ..|.:..:|||
Zfish   211 SSKAEQEEIERER-----------------QEGSQVSEK---------------HTSGEEDSEAS 243

  Fly   221 TNN 223
            :|:
Zfish   244 SNS 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 32/55 (58%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139
Homeodomain 146..202 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 15/78 (19%)
Blue background indicates that the domain is not in the aligned region.

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