Protein Alignment zen and Hoxb3

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001100512.1
• Gene: Hoxb3 / 303488
• RGDID: 1310780
• Length: 429
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 68/215 - (31%)
• Similarity: 90/215 - (41%)
• Gaps: 49/215 - (22%)

  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKD------- 148
            ||:|||:||.||||||.||..|.||.|.||:|:|..|:|.|||:||||||||||:|||
  Rat   188 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLA 252

  Fly   149 -IQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYS-------------------------QDPRE 187
             ..|...|..    :.||..||. .|.:..|.|.:                         |.|.:
  Rat   253 SSSGGPSPAG----SPPQPMQST-AGFMNALHSMTPSYDSPSPPAFSKGHQNAYALPSNYQPPLK 312

  Fly   188 GTAAAEKRPMMAVAPVNPKPDYQASQKMKTEASTNNGMCSSADLSEILEHLAQTTAAPQVSTATS 252
            |..|.:|      .|..|.|:|::.     ....|.|...:..:.....::.....|..:.....
  Rat   313 GCGAPQK------YPPTPAPEYESH-----VLQANGGAYGTPTMQGSPVYVGGGGYADPLPPPAG 366

  Fly   253 STGTSTNSASSSSSGHYSYN 272
            .:....|..|...||:..||
  Rat   367 PSLYGLNHLSHHPSGNLDYN 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	38/55 (69%)
Hoxb3	NP_001100512.1	Homeodomain	188..244	CDD:459649	38/55 (69%)
		DUF4074	365..427	CDD:463833	6/22 (27%)