DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxb6a

DIOPT Version :9

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571194.1 Gene:hoxb6a / 30341 ZFINID:ZDB-GENE-990415-106 Length:228 Species:Danio rerio


Alignment Length:104 Identity:46/104 - (44%)
Similarity:57/104 - (54%) Gaps:14/104 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DH----CSPQHVHQQHVSSDENLPSQPNHD-SQRVKL---------KRSRTAFTSVQLVELENEF 109
            ||    |:.......:..:||..||.|.:. .||:..         :|.|..:|..|.:|||.||
Zfish   105 DHRKTDCTGSTGKSIYPEADEQKPSAPVYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLELEKEF 169

  Fly   110 KSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKD 148
            ..|.||.|.||||||..|.|.|||:||||||||||:||:
Zfish   170 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeobox 93..146 CDD:278475 33/52 (63%)
hoxb6aNP_571194.1 Antp-type hexapeptide 132..137 0/4 (0%)
Homeobox 154..206 CDD:278475 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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