DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxb2a

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:253 Identity:73/253 - (28%)
Similarity:93/253 - (36%) Gaps:88/253 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP 155
            :|.|||:|:.||:|||.||..|.||.|.||:|||..|.|.|||||:||||||||.|:....||:.
Zfish   159 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHRDG 223

  Fly   156 KSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQKMKTEAS 220
            :        :.|.|..            |..|||.|                             
Zfish   224 Q--------EGEPSGF------------DLLEGTDA----------------------------- 239

  Fly   221 TNNGMCSSADLSEILEHLAQTTAAPQVSTATSSTGTSTNSASSSSSGHYSYNVDLVLQSIKQDLE 285
                  ||...|:.||.....:|||..|....:|...|||:                        
Zfish   240 ------SSPYSSQSLEVSGSGSAAPSESETCPTTAAYTNSS------------------------ 274

  Fly   286 AAAQAWSKSKSAPILATQSWHPSSQSQVPTSVHAAPSMNLSWGEPA--AKSRKLSVNH 341
                  .||:..| ...|:..|...|...|:||:.|....:...|.  |:.|.....|
Zfish   275 ------DKSQPTP-EEGQASQPEPASVPDTAVHSPPYPTPTADNPTTMAEGRAAGPEH 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 36/55 (65%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100
Antp-type hexapeptide 103..108
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155
Homeodomain 159..215 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 39/201 (19%)
PRK11907 237..>320 CDD:237019 27/148 (18%)
Blue background indicates that the domain is not in the aligned region.

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