DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Hmx3

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001099772.1 Gene:Hmx3 / 293537 RGDID:1559927 Length:356 Species:Rattus norvegicus


Alignment Length:122 Identity:42/122 - (34%)
Similarity:62/122 - (50%) Gaps:11/122 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP 155
            |::||.|:..|:.:||:.|....||..:.|..:|..|.|.|.||||||||||.|:|:.:.     
  Rat   228 KKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLA----- 287

  Fly   156 KSNAKLAQPQAEQSAHRGIVK-RLMSYSQDPREGTAAAEKRPMMAVAPV--NPKPDY 209
               |:|.......:|.:.||: .::.:.....||.|||...|:....|:  .|.|.|
  Rat   288 ---AELEAANLSHAAAQRIVRVPILYHENSAAEGAAAAAGAPVPVSQPLLTFPHPVY 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 26/55 (47%)
Hmx3NP_001099772.1 Homeodomain 228..284 CDD:459649 26/55 (47%)

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