DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Msx2

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_037114.2 Gene:Msx2 / 25483 RGDID:3116 Length:267 Species:Rattus norvegicus


Alignment Length:57 Identity:28/57 - (49%)
Similarity:37/57 - (64%) Gaps:0/57 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147
            ::.||.||:.||:.||.:|:...||....|.|.:..|:|.|.||||||||||.|.|:
  Rat   143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 27/55 (49%)
Msx2NP_037114.2 Homeodomain 143..199 CDD:459649 27/55 (49%)

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