Protein Alignment zen and Hoxc4

DIOPT Version :9

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001103354.1
• Gene: Hoxc4 / 24459
• RGDID: 1586210
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 176
• Identity: 66/176 - (37%)
• Similarity: 87/176 - (49%)
• Gaps: 29/176 - (16%)

  Fly     8 YPVHQAKVGSYSADPSEVKYSDLIYGHHH--DVNPIGLPPNYNQMNSNPTTLNDHCS---PQH-- 65
            ||..|....|.....:...:.....||||  ...|:..|...:..:::|:.....||   |.|
  Rat    62 YPERQYSCTSLQGPGNSRAHGPAQAGHHHPEKSQPLCEPAPLSGASASPSPAPPACSQPAPDHPS 126

  Fly    66 ------------VHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRT 118
                        :.:.|||:     ..||::..  :.||||||:|..|::|||.||..|.||.|.
  Rat   127 SAASKQPIVYPWMKKIHVST-----VNPNYNGG--EPKRSRTAYTRQQVLELEKEFHYNRYLTRR 184

  Fly   119 RRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQP 164
            ||||||..|.|.|||:||||||||||:|||   ||.|.:..:.|.|
  Rat   185 RRIEIAHSLCLSERQIKIWFQNRRMKWKKD---HRLPNTKVRSAPP 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeobox	93..146	CDD:278475	36/52 (69%)
Hoxc4	NP_001103354.1	Homeobox	159..213	CDD:395001	36/53 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.900