DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and ceh-28

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_510169.4 Gene:ceh-28 / 191619 WormBaseID:WBGene00000450 Length:201 Species:Caenorhabditis elegans


Alignment Length:170 Identity:53/170 - (31%)
Similarity:71/170 - (41%) Gaps:37/170 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVMHYYPVHQAKVGSYSADPSEVKYS-----DLIYGHHHD----VNP-------------IGL 43
            :||.....|....:....||.|||.|.:     :|..|....    .||             :|.
 Worm     6 ISSTTVILPSEVIQPPQQSAVPSEFKNTLPSRLNLFEGFDQSFSELTNPYQPVIPLMQRESLLGA 70

  Fly    44 PPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDE-NLPSQPNHDSQRVKLKRSRTAFTSVQLVELEN 107
            ...|:..:.|..:..:       |:||.:.|. ||.||.       :.::.|..||..|:.|||.
 Worm    71 SSYYSSPSQNQRSYQN-------HRQHSNPDTINLRSQQ-------QKRKPRVLFTQHQVNELEE 121

  Fly   108 EFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147
            .||...|:..|.|.|:||.|.|...||||||||||.|.|:
 Worm   122 RFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKR 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 28/55 (51%)
ceh-28NP_510169.4 Homeodomain 105..161 CDD:459649 28/55 (51%)

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