DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Pdx1

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_032840.1 Gene:Pdx1 / 18609 MGIID:102851 Length:284 Species:Mus musculus


Alignment Length:279 Identity:73/279 - (26%)
Similarity:103/279 - (36%) Gaps:109/279 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVMHYYPVHQ----------AKVGSYSADPSEVKY-----------------SDLIYGHHHDV 38
            |:|...||...|          ..|..:||:|....|                 ..|..|...|:
Mouse     1 MNSEEQYYAATQLYKDPCAFQRGPVPEFSANPPACLYMGRQPPPPPPPQFTSSLGSLEQGSPPDI 65

  Fly    39 NPIGLPPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQ-----------PN-------HDS 85
            :|..:||          ..:|..:..|:|       .:||:|           ||       .:.
Mouse    66 SPYEVPP----------LASDDPAGAHLH-------HHLPAQLGLAHPPPGPFPNGTEPGGLEEP 113

  Fly    86 QRVKL-----------------------------KRSRTAFTSVQLVELENEFKSNMYLYRTRRI 121
            .||:|                             ||:|||:|..||:|||.||..|.|:.|.||:
Mouse   114 NRVQLPFPWMKSTKAHAWKGQWAGGAYTAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRV 178

  Fly   122 EIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPR 186
            |:|..|:|.||.:||||||||||:||:     |.|..:     ....|...|        .::|.
Mouse   179 ELAVMLNLTERHIKIWFQNRRMKWKKE-----EDKKRS-----SGTPSGGGG--------GEEPE 225

  Fly   187 EGTAAAEKRPMMAVAPVNP 205
            :..|......::||.|:.|
Mouse   226 QDCAVTSGEELLAVPPLPP 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 34/55 (62%)
Pdx1NP_032840.1 Transactivation domain. /evidence=ECO:0000250 13..73 11/69 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..116 17/102 (17%)
Antp-type hexapeptide 119..124 0/4 (0%)
Homeodomain 148..204 CDD:459649 34/55 (62%)
Nuclear localization signal 198..204 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..284 12/61 (20%)

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