DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and ceh-27

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001256348.1 Gene:ceh-27 / 185853 WormBaseID:WBGene00000449 Length:263 Species:Caenorhabditis elegans


Alignment Length:226 Identity:52/226 - (23%)
Similarity:81/226 - (35%) Gaps:81/226 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PVHQAKVGSYSADPSEVKYSDLIYGHHHDVN-------------PIGLPP---NYNQMNSNPTTL 57
            |...|...||.|.|::         :.||.:             |:...|   |:|:..:|...|
 Worm    31 PATTAAQMSYFAFPNQ---------YPHDFSSYNTSAAYATAPYPMATHPQLANFNRFQTNQLNL 86

  Fly    58 NDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIE 122
                              .|.:|.|   ..:..::.|..|:..|:..||.:|:.|.||....|..
 Worm    87 ------------------GLTTQQN---MMISRRKRRVLFSPQQVHVLERKFQINRYLSAADREN 130

  Fly   123 IAQRLSLCERQVKIWFQNRRMKFK-----------------KDIQGHREPKSNAKLAQPQAEQSA 170
            :|:.::|...||||||||:|.|.|                 :|....|:..|:..|.      |:
 Worm   131 LAKSINLSATQVKIWFQNQRYKCKRQEKEKKMDGGCYRDSDRDTDSDRDNDSSGSLG------SS 189

  Fly   171 HRGIVKRLMSYSQDPREGTAAAEKRPMMAVA 201
            ..||.|     .:|       .:::|.|..|
 Worm   190 MSGIKK-----EED-------EDRKPFMPSA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 23/72 (32%)
ceh-27NP_001256348.1 Homeodomain 99..155 CDD:459649 22/55 (40%)

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