DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Msx3

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_034966.1 Gene:Msx3 / 17703 MGIID:106587 Length:204 Species:Mus musculus


Alignment Length:115 Identity:43/115 - (37%)
Similarity:53/115 - (46%) Gaps:14/115 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRS-RTAFTSVQLVELENEFKSNMYLYR 117
            |..:...|.|:            .||.|....::.|..|. ||.||:.||:.||.:|....||..
Mouse    62 PPPVAHSCPPR------------APSPPPCTLRKHKTNRKPRTPFTTAQLLALERKFHQKQYLSI 114

  Fly   118 TRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP-KSNAKLAQPQA 166
            ..|.|.:..|||.|.||||||||||.|.|:..:...|. |..||...|.|
Mouse   115 AERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKLAAKPLLPAA 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 29/56 (52%)
Msx3NP_034966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..89 7/38 (18%)
Homeodomain 88..144 CDD:459649 29/55 (53%)

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