DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen and Msx1

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_034965.2 Gene:Msx1 / 17701 MGIID:97168 Length:303 Species:Mus musculus


Alignment Length:127 Identity:44/127 - (34%)
Similarity:59/127 - (46%) Gaps:25/127 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP 155
            ::.||.||:.||:.||.:|:...||....|.|.:..|||.|.||||||||||.|.|:..:...|.
Mouse   173 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEK 237

  Fly   156 KSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAE--------------KRPMMAVAPV 203
            ...|  |:|....:|..      :|:   |..|.||..              :|..:.||||
Mouse   238 LKMA--AKPMLPPAAFG------LSF---PLGGPAAVAAAAGASLYSASGPFQRAALPVAPV 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 28/55 (51%)
Msx1NP_034965.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..112
PTZ00449 <99..>248 CDD:185628 33/76 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..163
Homeodomain 173..229 CDD:459649 28/55 (51%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.