Protein Alignment zen and lin-39

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 183
• Identity: 58/183 - (31%)
• Similarity: 80/183 - (43%)
• Gaps: 42/183 - (22%)

  Fly     1 MSSVMHYYPVH-----QAKVGSYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNSNPTTLNDH 60
            :||.:.|.|:.     .|..||| .||:.   |..|..:......:| .|.|..:.......|..
 Worm    48 LSSTIGYDPMTASAALSAHFGSY-YDPTS---SSQIASYFASSQGLG-GPQYPILGDQSLCYNPS 107

  Fly    61 CSPQHVHQQHVSSDENLPSQPNHDSQRVK------------------------------LKRSRT 95
            .:..|...:|:..|::  ...:.|.:.:.                              .||.||
 Worm   108 VTSTHHDWKHLEGDDD--DDKDDDKKGISGDDDDMDKNSGGAVYPWMTRVHSTTGGSRGEKRQRT 170

  Fly    96 AFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKD 148
            |:|..|::|||.||.::.||.|.||||:|..|.|.||||||||||||||.||:
 Worm   171 AYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	36/55 (65%)
lin-39	NP_001021164.1	Homeodomain	166..222	CDD:459649	36/55 (65%)