DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Hoxc5

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_783857.1 Gene:Hoxc5 / 15424 MGIID:96196 Length:222 Species:Mus musculus


Alignment Length:192 Identity:66/192 - (34%)
Similarity:80/192 - (41%) Gaps:62/192 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GSYSADPSEVKYSDLIYGHHHDVNPIGLPP-------NYNQMNSNPTTLNDH--CSPQHVHQQHV 71
            |:|.: .|||:.|...|| ..|:: |..||       :...|.:||....|.  ||........:
Mouse    25 GNYGS-ASEVQASRYCYG-GLDLS-ITFPPPAPSNSLHGVDMAANPRAHPDRPACSAAAAPGHAL 86

  Fly    72 SSDENLPSQPNHDSQR------------------------------------------VKL---- 90
            ..||..|..|...||:                                          .||    
Mouse    87 GRDEAAPLNPGMYSQKAARPALEERAKSSGEIKEEQAQTGQPAGLSQPPAPPQIYPWMTKLHMSH 151

  Fly    91 ----KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKD 148
                |||||::|..|.:|||.||..|.||.|.||||||..|.|.|||:||||||||||:|||
Mouse   152 ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKD 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 37/55 (67%)
Hoxc5NP_783857.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..141 9/72 (13%)
Antp-type hexapeptide 140..145 0/4 (0%)
Homeodomain 156..212 CDD:459649 37/55 (67%)

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