DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Hoxc4

DIOPT Version :9

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_038581.2 Gene:Hoxc4 / 15423 MGIID:96195 Length:264 Species:Mus musculus


Alignment Length:176 Identity:66/176 - (37%)
Similarity:87/176 - (49%) Gaps:29/176 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YPVHQAKVGSYSADPSEVKYSDLIYGHHH--DVNPIGLPPNYNQMNSNPTTLNDHCS---PQH-- 65
            ||..|....|.....:...:.....||||  ...|:..|...:..:::|:.....||   |.|  
Mouse    62 YPERQYSCTSLQGPGNSRAHGPAQAGHHHPEKSQPLCEPAPLSGTSASPSPAPPACSQPAPDHPS 126

  Fly    66 ------------VHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRT 118
                        :.:.|||:     ..||::..  :.||||||:|..|::|||.||..|.||.|.
Mouse   127 SAASKQPIVYPWMKKIHVST-----VNPNYNGG--EPKRSRTAYTRQQVLELEKEFHYNRYLTRR 184

  Fly   119 RRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQP 164
            ||||||..|.|.|||:||||||||||:|||   ||.|.:..:.|.|
Mouse   185 RRIEIAHSLCLSERQIKIWFQNRRMKWKKD---HRLPNTKVRSAPP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeobox 93..146 CDD:278475 36/52 (69%)
Hoxc4NP_038581.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130 15/67 (22%)
Antp-type hexapeptide 135..140 0/4 (0%)
Homeobox 159..213 CDD:365835 36/53 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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