DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Hoxa9

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_034586.1 Gene:Hoxa9 / 15405 MGIID:96180 Length:271 Species:Mus musculus


Alignment Length:177 Identity:55/177 - (31%)
Similarity:83/177 - (46%) Gaps:35/177 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HYYP-VH-QAKVGSYSAD-----------PSEVKYSDLIYGHHHDVNPIGLPPNYNQ---MNSNP 54
            |::| || ||.|.:.:.|           |..:.::.|.....:.:.|..|......   ::::.
Mouse    86 HHHPYVHPQAPVAAAAPDGRYMRSWLEPTPGALSFAGLPSSRPYGIKPEPLSARRGDCPTLDTHT 150

  Fly    55 TTLNDH-CSPQHV--------------HQQHVSSDENLPSQPNHDS----QRVKLKRSRTAFTSV 100
            .:|.|: |....|              :.::.|..:..|..||:.:    .....::.|..:|..
Mouse   151 LSLTDYACGSPPVDREKQPSEGAFSENNAENESGGDKPPIDPNNPAANWLHARSTRKKRCPYTKH 215

  Fly   101 QLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147
            |.:|||.||..||||.|.||.|:|:.|:|.||||||||||||||.||
Mouse   216 QTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 33/55 (60%)
Hoxa9NP_034586.1 Hox9_act 1..192 CDD:461369 18/105 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..197 7/42 (17%)
Homeodomain 206..262 CDD:459649 33/55 (60%)

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