DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hmx1

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_002940264.3 Gene:hmx1 / 100498485 XenbaseID:XB-GENE-6259139 Length:281 Species:Xenopus tropicalis


Alignment Length:187 Identity:49/187 - (26%)
Similarity:80/187 - (42%) Gaps:47/187 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YSADPSEV---KYSDL---IYGHHHDVNPIGLPPNYNQMN------------SNPTTLNDHCSPQ 64
            :.|.|||:   .:|.|   |..:|:     ..|...|.|.            ::|.| :|..||:
 Frog    43 HHAQPSELTGGHFSSLCCQISPYHY-----SYPLRENTMEWYRRAQATYIGCTSPDT-SDRDSPE 101

  Fly    65 HVH---------QQHVSS--------------DENLPSQPNHDSQRVKLKRSRTAFTSVQLVELE 106
            ...         ::|..|              :|...::.:.|.:..:.|::||.|:..|:.:||
 Frog   102 IAEAGEGPGRGLRKHSESPGERREDYACKEEEEEEEKAEQDSDQRSSRKKKTRTVFSRSQVFQLE 166

  Fly   107 NEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQ 163
            :.|....||..:.|..:|..|.|.|.||||||||||.|:|:.:....|..:.:..:|
 Frog   167 STFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAADLEAANISHTSQ 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 26/55 (47%)
hmx1XP_002940264.3 Homeodomain 151..207 CDD:459649 26/55 (47%)

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