DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxd9

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_012826755.2 Gene:hoxd9 / 100497640 XenbaseID:XB-GENE-485791 Length:278 Species:Xenopus tropicalis


Alignment Length:98 Identity:46/98 - (46%)
Similarity:56/98 - (57%) Gaps:4/98 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 NPTTLNDHCSPQHVHQQHVSSDENL-PSQP--NHDSQRVKLKRSRTAFTSVQLVELENEFKSNMY 114
            |.|.|.:....|...||.....:.| |:.|  |....| ..::.|..:|..|.:|||.||..|||
 Frog   172 NSTELKEEKEQQQQQQQQQQQQQQLDPNNPAANWIHAR-STRKKRCPYTKYQTLELEKEFLFNMY 235

  Fly   115 LYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147
            |.|.||.|:|:.|:|.||||||||||||||.||
 Frog   236 LTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 33/55 (60%)
hoxd9XP_012826755.2 Hox9_act 1..181 CDD:461369 3/8 (38%)
Homeodomain 212..260 CDD:459649 26/47 (55%)

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