DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxd10

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_031749087.1 Gene:hoxd10 / 100038085 XenbaseID:XB-GENE-485204 Length:274 Species:Xenopus tropicalis


Alignment Length:212 Identity:49/212 - (23%)
Similarity:89/212 - (41%) Gaps:67/212 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSVMHYYPVHQAKVGSYSADPSEVKY-------------------------------SDLIYGHH 35
            |::.|..||.:.....|..:.::.:|                               ||.:..||
 Frog    49 SNLTHVQPVREVAFREYGLERTKWQYRGTYPSYYPSEEVMHRDLIQPANRRSDMLFKSDSVCNHH 113

  Fly    36 -------HDVNPIG----LPPNYNQM------------------NSNPTTLNDHCSPQHVHQQHV 71
                   :..:.:|    ||..::|.                  .|:|...|..........:.|
 Frog   114 GPPSSQSNFYSSVGRNGILPQGFDQFYDSSQNQGYQVGMEEQPAKSDPKATNAPTKAPSTQDKKV 178

  Fly    72 SSDENLPSQPNHDSQR------VKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLC 130
            ::|.: |..|:.::::      .:|::.|..::..|:.|||.||..|:|:.:.:|:::::.|:|.
 Frog   179 TNDSS-PGTPSGEAEKSNSSASQRLRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLNLT 242

  Fly   131 ERQVKIWFQNRRMKFKK 147
            :|||||||||||||.||
 Frog   243 DRQVKIWFQNRRMKEKK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 25/55 (45%)
hoxd10XP_031749087.1 DUF3528 41..144 CDD:432284 14/94 (15%)
Homeodomain 203..259 CDD:459649 25/55 (45%)

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