DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and HB16

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_195716.1 Gene:HB16 / 830169 AraportID:AT4G40060 Length:294 Species:Arabidopsis thaliana


Alignment Length:204 Identity:51/204 - (25%)
Similarity:85/204 - (41%) Gaps:30/204 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNR 104
            |||.:|.:..    |:..||:.|.|...|...|:.:::|.|.|..|||.:||||||.:.|.....
plant    57 SEKKRRLKVD----QVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLE 117

  Fly   105 KGAIGALTTSIPLSSQSSEDLQKDD----QIVERLLRYANTNVETAPLRQVDHGVLEEGQITPPY 165
            |. .|.|.........:.:.|::|:    |.:.::....|...:....:.:..||.||       
plant   118 KD-YGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKEE------- 174

  Fly   166 QSYDYLHEFSPEPMALPQLPFNEFDANWASSWLGLEPTIPIAENVIEHNTQDQPMIQNFCWDSNS 230
                .:|:....|.:..|...:....|:..|:..|...:| ...|:|..:.|.      | ||::
plant   175 ----EVHKTDSIPSSPLQFLEHSSGFNYRRSFTDLRDLLP-NSTVVEAGSSDS------C-DSSA 227

  Fly   231 --SSASSSD 237
              :..:|||
plant   228 VLNDETSSD 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 20/55 (36%)
HB16NP_195716.1 Homeodomain 59..112 CDD:459649 21/56 (38%)
HALZ 114..155 CDD:460477 6/41 (15%)

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