DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and HB-2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_193411.1 Gene:HB-2 / 827384 AraportID:AT4G16780 Length:284 Species:Arabidopsis thaliana


Alignment Length:174 Identity:39/174 - (22%)
Similarity:69/174 - (39%) Gaps:41/174 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLK-KSTNRKG 106
            :.|.:...|..|...||..|..:..|...::..::::|.|..|||::||||||.:.| |.|.   
plant   126 NSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTE--- 187

  Fly   107 AIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAPLRQVDHGVLEEGQITPPYQSYDYL 171
                  .......:..|:|.::::.:::         |...||.:        :::|.:    |:
plant   188 ------VDCEFLRRCCENLTEENRRLQK---------EVTELRAL--------KLSPQF----YM 225

  Fly   172 HEFSPEPMALPQLPFNEFDANWASSWLGLEPTIPIAENVIEHNT 215
            | .|| |..|...|..|.        :.:.|..|.|.....|.:
plant   226 H-MSP-PTTLTMCPSCEH--------VSVPPPQPQAATSAHHRS 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 19/56 (34%)
HB-2NP_193411.1 HD-ZIP_N 8..107 CDD:461370
HOX 128..182 CDD:197696 18/53 (34%)
HALZ 184..227 CDD:128634 10/73 (14%)
Blue background indicates that the domain is not in the aligned region.

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