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Protein Alignment zen2 and vsx2
DIOPT Version :9
Sequence 1: | NP_476794.1 |
Gene: | zen2 / 40827 |
FlyBaseID: | FBgn0004054 |
Length: | 252 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005158862.1 |
Gene: | vsx2 / 796163 |
ZFINID: | ZDB-GENE-001222-1 |
Length: | 393 |
Species: | Danio rerio |
Alignment Length: | 184 |
Identity: | 49/184 - (26%) |
Similarity: | 72/184 - (39%) |
Gaps: | 43/184 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 QSENYFVDNYSVSDLMMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLA 69
||.:...|:.|.|:..| :..:.:.....|.:|.||.|:|.||.|||:.|:...|..
Zfish 136 QSASSDSDDVSSSERKM---------SKSSLSQSKKRKKRRHRTIFTSYQLEELEKAFNEAHYPD 191
Fly 70 RTRRIEISQRLALTERQVKIWFQNRRMKLKKSTN---------RKGAIGALTT-SIPLSSQSSED 124
...|..::.:..|.|.::::||||||.|.:|... ..|..||:.. ||||.
Zfish 192 VYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLP------ 250
Fly 125 LQKDDQIVERLLRYANTNV--ETAPLRQVDHGVLEEGQITPPYQSYDYLHEFSP 176
|.:|:.|...: ..||...|..|. |..|....||:.|
Zfish 251 --------ESILKSAKDGIMDSCAPWLLVQDGF--------PTTSCFSKHEYPP 288
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
zen2 | NP_476794.1 |
Homeobox |
46..99 |
CDD:278475 |
21/52 (40%) |
vsx2 | XP_005158862.1 |
Homeobox |
170..221 |
CDD:278475 |
20/50 (40%) |
OAR |
338..355 |
CDD:281777 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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