DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hmx3a

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571709.3 Gene:hmx3a / 60310 ZFINID:ZDB-GENE-001020-1 Length:297 Species:Danio rerio


Alignment Length:158 Identity:44/158 - (27%)
Similarity:70/158 - (44%) Gaps:37/158 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VDNYSVSD--LMMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRR 73
            :|::..||  ....||                 :.|::||.||..|:.:||..|.:.:||:.:.|
Zfish   153 IDDWKKSDDGADKKPC-----------------RKKKTRTVFSRSQVFQLESTFDMKRYLSSSER 200

  Fly    74 IEISQRLALTERQVKIWFQNRRMKLKK-------STNRKGAIGALTTSIPL-----SSQSSEDLQ 126
            ..::..|.|||.||||||||||.|.|:       :.|...|.......:|:     |:..|.:..
Zfish   201 AGLAASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLSHAAAQRIVRVPILYHENSASESTNTA 265

  Fly   127 KDDQIVERLLR------YANTNVETAPL 148
            .:..:.:.||.      |::..|.:.||
Zfish   266 GNVPVSQPLLTFPHPVYYSHPIVTSVPL 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)
hmx3aNP_571709.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..172 5/35 (14%)
Blue background indicates that the domain is not in the aligned region.

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