DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and nkx2.4b

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571664.1 Gene:nkx2.4b / 58112 ZFINID:ZDB-GENE-000830-1 Length:307 Species:Danio rerio


Alignment Length:192 Identity:51/192 - (26%)
Similarity:74/192 - (38%) Gaps:54/192 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YSVSDLMMYPCVELN------VEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTR 72
            |......|.|...:|      ::|:.:..|..:...::.|..||..|:.||||.|...|||:...
Zfish   112 YPTISRFMGPSAGMNMGTLPGMDASKSMVTLHAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPE 176

  Fly    73 RIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLR 137
            |..::..:.||..||||||||.|.|:|:....|.:                  |:.|.       
Zfish   177 REHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAS------------------QQQDS------- 216

  Fly   138 YANTNVETAPLRQVDHGVLEE---------GQITPPYQ------------SYDYLHEFSPEP 178
             .|...:.:| |:|...||.:         |..||.:|            |.:.|.|.||.|
Zfish   217 -GNMCAQQSP-RRVALPVLVKDGKPCQNGSGTPTPIHQQVQSVLGSETLASAEDLEEMSPSP 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 25/55 (45%)
nkx2.4bNP_571664.1 Homeodomain 148..204 CDD:459649 25/55 (45%)

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