DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hoxc9

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001017256.1 Gene:hoxc9 / 550010 XenbaseID:XB-GENE-482330 Length:100 Species:Xenopus tropicalis


Alignment Length:73 Identity:36/73 - (49%)
Similarity:48/73 - (65%) Gaps:0/73 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMK 97
            |.|....:..:::.|..::..|.:|||:||..|.||.|.||.|:::.|.||||||||||||||||
 Frog    22 PVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMK 86

  Fly    98 LKKSTNRK 105
            :||....|
 Frog    87 MKKMNKEK 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 31/55 (56%)
hoxc9NP_001017256.1 Homeodomain 33..81 CDD:459649 24/47 (51%)

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