DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen2 and pb

DIOPT Version :9

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:211 Identity:71/211 - (33%)
Similarity:94/211 - (44%) Gaps:52/211 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAI 108
            :|.|||:::.||:|||:|||.||||.|.|||||:..|.|||||||:||||||||.|:.|      
  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT------ 257

  Fly   109 GALTTSIPLSSQSSED----LQKDDQIVERLLRYANTNVETAPLRQVDHGVLEEGQITPPYQSYD 169
                    ||....||    |:.||...:     :|:|     .::...|........|...|..
  Fly   258 --------LSKTDDEDNKDSLKGDDDQSD-----SNSN-----SKKSCQGCELPSDDIPDSTSNS 304

  Fly   170 YLHE------FSPEPMALPQLPFNEFDANWASSWLGLEPTIPIAENVIEHNTQDQPMIQNFCWDS 228
            ..|.      .:..|.|....|.:..:...:|:.:|  .|...|.|||                |
  Fly   305 RGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMG--STTVSASNVI----------------S 351

  Fly   229 NSSSASSSDILDVDYD 244
            ..||.:||..||.|.:
  Fly   352 ADSSVASSVSLDEDIE 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeobox 46..99 CDD:278475 37/52 (71%)
pbNP_476669.3 COG5576 168..274 CDD:227863 45/88 (51%)
Homeobox 202..254 CDD:278475 37/51 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439789
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45664
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.