DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and msx2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_002936749.1 Gene:msx2 / 394987 XenbaseID:XB-GENE-852974 Length:256 Species:Xenopus tropicalis


Alignment Length:67 Identity:33/67 - (49%)
Similarity:44/67 - (65%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKL 98
            |.|.|..:.:::.||.|::.||:.|||:|...:||:...|.|.|..|.|||.||||||||||.|.
 Frog   122 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKA 186

  Fly    99 KK 100
            |:
 Frog   187 KR 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 29/55 (53%)
msx2XP_002936749.1 Homeodomain 132..188 CDD:459649 29/55 (53%)

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