DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and msx2b

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571351.3 Gene:msx2b / 30531 ZFINID:ZDB-GENE-980526-492 Length:241 Species:Danio rerio


Alignment Length:124 Identity:44/124 - (35%)
Similarity:61/124 - (49%) Gaps:13/124 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLK--- 99
            |..:.:::.||.|::.||:.|||:|...:||:...|.|.|..|.|||.||||||||||.|.|   
Zfish   110 RKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRAKAKRLQ 174

  Fly   100 -------KSTNRKGAIGALTTSIPLSSQ--SSEDLQKDDQIVER-LLRYANTNVETAPL 148
                   |.|.:.......:..:||.:|  |:..|.......:| ||..|...:...||
Zfish   175 EAELEKLKLTAKPALHPNFSLPLPLGTQLHSAVSLYGQSYPYQRPLLPVAPVGLYGTPL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 30/65 (46%)
msx2bNP_571351.3 Homeodomain 116..172 CDD:459649 29/55 (53%)

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