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Protein Alignment zen2 and Hoxb1
DIOPT Version :10
| Sequence 1: | NP_476794.1 |
Gene: | zen2 / 40827 |
FlyBaseID: | FBgn0004054 |
Length: | 252 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001094022.1 |
Gene: | Hoxb1 / 303491 |
RGDID: | 1310298 |
Length: | 297 |
Species: | Rattus norvegicus |
| Alignment Length: | 125 |
Identity: | 51/125 - (40%) |
| Similarity: | 66/125 - (52%) |
Gaps: | 15/125 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 LNVEAAPTATTRSSEKSKRS----RTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQV 87
:.|:..|..|.:.||....: ||.|::.||.|||:|||.||||:|.||:||:..|.|.|.||
Rat 179 MKVKRNPPKTAKVSELGLGTPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 243
Fly 88 KIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAP 147
||||||||||.||.....|.:.|.....|..:.. :..|| .|.|:.|.:|
Rat 244 KIWFQNRRMKQKKREREGGRVPAGPPGCPKEAAG----EASDQ-------SACTSPEASP 292
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| zen2 | NP_476794.1 |
Homeodomain |
44..100 |
CDD:459649 |
35/59 (59%) |
| Hoxb1 | NP_001094022.1 |
None |
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