DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hoxc6a

DIOPT Version :9

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571198.1 Gene:hoxc6a / 30346 ZFINID:ZDB-GENE-990415-113 Length:231 Species:Danio rerio


Alignment Length:149 Identity:50/149 - (33%)
Similarity:82/149 - (55%) Gaps:34/149 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IQSENYFVDNYSV------------SDLMMYPCVE-LNVEAAPTATTRSSEKSKRSRTAFSSLQL 55
            :.::::....|::            :::.:||.:: :|   :.:.....|:: :|.|..:|..|.
Zfish    94 LNAQSHVAQEYNLEQARAGTQDQKANNIQIYPWMQRMN---SHSGVGYGSDR-RRGRQIYSRYQT 154

  Fly    56 IELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIP---- 116
            :|||:|||.|:||.|.|||||:..|.|||||:||||||||||.||.||       ||:::|    
Zfish   155 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKETN-------LTSTVPGTES 212

  Fly   117 ------LSSQSSEDLQKDD 129
                  ...::.|:.:|.|
Zfish   213 AGTPQETEKETEEEPKKKD 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeobox 46..99 CDD:278475 34/52 (65%)
hoxc6aNP_571198.1 Antp-type hexapeptide 123..128 2/4 (50%)
Homeobox 146..198 CDD:278475 34/51 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..231 7/37 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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