DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hoxb1a

DIOPT Version :9

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571190.2 Gene:hoxb1a / 30337 ZFINID:ZDB-GENE-990415-101 Length:316 Species:Danio rerio


Alignment Length:149 Identity:55/149 - (36%)
Similarity:72/149 - (48%) Gaps:32/149 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SDLMMYPCVELNVEAAPTATTRSSEKSKRS------------------RTAFSSLQLIELEREFH 63
            :||......|.:.:..|...|....|.||:                  ||.|::.||.|||:|||
Zfish   178 ADLSASQGTEKDTDQPPPGKTFDWMKVKRNPPKTGKVAEYGLGPQNTIRTNFTTKQLTELEKEFH 242

  Fly    64 LNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKD 128
            .:|||.|.||:||:..|.|.|.||||||||||||.|| ..::|.       .|.||.||:||:..
Zfish   243 FSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKK-REKEGL-------APASSTSSKDLEDQ 299

  Fly   129 DQIVERLLRYANTNVETAP 147
            ..      ...:|:.|.:|
Zfish   300 SD------HSTSTSPEASP 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeobox 46..99 CDD:278475 34/70 (49%)
hoxb1aNP_571190.2 Homeobox 226..278 CDD:278475 34/51 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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