DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Hoxb8

DIOPT Version :9

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001178578.1 Gene:Hoxb8 / 24457 RGDID:1586211 Length:243 Species:Rattus norvegicus


Alignment Length:160 Identity:55/160 - (34%)
Similarity:72/160 - (45%) Gaps:40/160 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DLMMYPCVELNVEAAPTATTRSSEKS------------------KRSRTAFSSLQLIELEREFHL 64
            ||:.|...:|...:........||:|                  :|.|..:|..|.:|||:||..
  Rat   103 DLVQYADCKLAAASGLGEEAEGSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLF 167

  Fly    65 NKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDD 129
            |.||.|.||||:|..|.||||||||||||||||.||..|:        ...|.|....|:|:|: 
  Rat   168 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK--------DKFPSSKCEQEELEKE- 223

  Fly   130 QIVERLLRYANTNVETAPLRQVDHGVLEEG 159
                        .:|.|| ...:.|..::|
  Rat   224 ------------KLERAP-ETAEQGDAQKG 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeobox 46..99 CDD:278475 34/52 (65%)
Hoxb8NP_001178578.1 Homeobox 150..203 CDD:395001 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.900

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