DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and ceh-30

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_508524.2 Gene:ceh-30 / 191620 WormBaseID:WBGene00000451 Length:237 Species:Caenorhabditis elegans


Alignment Length:176 Identity:50/176 - (28%)
Similarity:79/176 - (44%) Gaps:36/176 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTN 103
            |.:||:::||.|:..||.|||..|...|||:...|::::.|:.||:.|||.|:||||.|.|:.. 
 Worm    91 SCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQA- 154

  Fly   104 RKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLR---YANTNVETAPL-RQVDHGVLEEGQITPP 164
                    |:.:.|.|:..     :...|:.|:|   |....:...|: .|:....|....|.||
 Worm   155 --------TSGMDLLSEPG-----NLSAVQNLIRSSPYWANYITALPMGTQLPMMGLPMSMIVPP 206

  Fly   165 YQSYDYLHEFSPEPMALPQLPFNEFDANWASSWLGLE-PTIPIAEN 209
                  .|.|.|..           .:|..|:.:..| |.:.::.|
 Worm   207 ------AHAFQPSS-----------SSNSPSTHISSESPQLDVSSN 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 25/55 (45%)
ceh-30NP_508524.2 Homeodomain 96..152 CDD:459649 25/55 (45%)

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