DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and pha-2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_508131.4 Gene:pha-2 / 187454 WormBaseID:WBGene00004011 Length:214 Species:Caenorhabditis elegans


Alignment Length:130 Identity:37/130 - (28%)
Similarity:62/130 - (47%) Gaps:35/130 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NYSVSDLM----------MYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKY 67
            |.:|:..|          :||.:           ::|.:|.|..:..|::.|...||.:|..:||
 Worm    95 NMNVNQTMGNMWDPRLSWLYPYM-----------SKSPQKRKGGQIRFTNEQTDALEHKFDSHKY 148

  Fly    68 LARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKG-------------AIGALTTSIPLSS 119
            |:...|.::::.|:|:|||||.||||||.|.:: ..:.|             ::|.|.:|.|..|
 Worm   149 LSPQERKKLAKSLSLSERQVKTWFQNRRAKWRR-VRKDGEDEDEMPNGASARSLGQLQSSNPFLS 212

  Fly   120  119
             Worm   213  212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 24/55 (44%)
pha-2NP_508131.4 Homeodomain 130..181 CDD:459649 23/50 (46%)

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