DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and ceh-43

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001338832.1 Gene:ceh-43 / 175581 WormBaseID:WBGene00000463 Length:282 Species:Caenorhabditis elegans


Alignment Length:221 Identity:62/221 - (28%)
Similarity:88/221 - (39%) Gaps:58/221 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EAAPTATTR------------SSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLAL 82
            ||.|..||.            ..:|.::.||.::|.||..|:::|...:|||...|..::..|.|
 Worm    77 EAFPEHTTTKIVEGCEAKYNVKGKKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGL 141

  Fly    83 ---------TERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDD--------- 129
                     ||.||||||||||.|.||   :||.          ||..:.|.:.||         
 Worm   142 SQTQRAQPITEFQVKIWFQNRRSKQKK---QKGG----------SSDHASDEEDDDTEESKPESP 193

  Fly   130 QIVERLLRYANTNVETAPLRQVDHGVLEEGQITPP------YQS-YDYLHEFSPEPMALPQLPFN 187
            .:.|.::...::...|.....:...:.||   .||      |.| |.|..:||   ..||  |..
 Worm   194 PMGESVMIQESSEPRTLVSSSIKTEMKEE---YPPMTLNEQYASPYLYGSDFS---TILP--PSQ 250

  Fly   188 EFDANWASSWLGLEPTIPIAENVIEH 213
            .|..|...:..|..|:|.....|.::
 Worm   251 GFPNNALYNTAGAYPSIDYTNGVYQN 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 26/64 (41%)
ceh-43NP_001338832.1 Homeodomain 103..168 CDD:459649 26/64 (41%)

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