Protein Alignment zen2 and Hoxa1

DIOPT Version :10

• Sequence 1: NP_476794.1
• Gene: zen2 / 40827
• FlyBaseID: FBgn0004054
• Length: 252
• Species: Drosophila melanogaster
• Sequence 2: NP_034579.3
• Gene: Hoxa1 / 15394
• MGIID: 96170
• Length: 336
• Species: Mus musculus
• Alignment Length: 103
• Identity: 45/103 - (43%)
• Similarity: 61/103 - (59%)
• Gaps: 6/103 - (5%)

  Fly    27 LNVEAAPTATTRSSE-----KSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQ 86
            :.|:..|..|.:..|     :....||.|::.||.|||:|||.||||.|.||:||:..|.|.|.|
Mouse   209 MKVKRNPPKTGKVGEYGYVGQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 273

  Fly    87 VKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSED 124
            |||||||||||.|| ..::|.:.....:.|.|.:.:|:
Mouse   274 VKIWFQNRRMKQKK-REKEGLLPISPATPPGSDEKTEE 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen2	NP_476794.1	Homeodomain	44..100	CDD:459649	35/55 (64%)
Hoxa1	NP_034579.3	COG5576	177..>287	CDD:227863	39/77 (51%)
		Homeodomain	234..287	CDD:459649	35/52 (67%)