DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Nkx2-5

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_446103.2 Gene:Nkx2-5 / 114109 RGDID:620520 Length:319 Species:Rattus norvegicus


Alignment Length:111 Identity:36/111 - (32%)
Similarity:50/111 - (45%) Gaps:25/111 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKI 89
            |||:......|....:.:.::.|..||..|:.||||.|...:||:...|.:::..|.||..||||
  Rat   119 VELDKAETDGAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKI 183

  Fly    90 WFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERL 135
            ||||||.|.|:                         |:.||.:|.|
  Rat   184 WFQNRRYKCKR-------------------------QRQDQTLELL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 26/55 (47%)
Nkx2-5NP_446103.2 Homeodomain 144..194 CDD:459649 25/49 (51%)

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