DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and CDX1

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001795.2 Gene:CDX1 / 1044 HGNCID:1805 Length:265 Species:Homo sapiens


Alignment Length:69 Identity:32/69 - (46%)
Similarity:46/69 - (66%) Gaps:3/69 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101
            ||:.:|   .|..::..|.:|||:|||.::|:...|:.|::..|.||||||||||||||.|.:|.
Human   151 TRTKDK---YRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKV 212

  Fly   102 TNRK 105
            ..:|
Human   213 NKKK 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)
CDX1NP_001795.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 9..153 1/1 (100%)
Caudal_act 13..142 CDD:461413
Homeodomain 156..211 CDD:459649 28/57 (49%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:28473536 157..178 8/20 (40%)
Interaction with 5-mCpG DNA. /evidence=ECO:0000305|PubMed:28473536 196..207 10/10 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..265 3/10 (30%)
Blue background indicates that the domain is not in the aligned region.

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