DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hoxd8

DIOPT Version :9

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001135589.1 Gene:hoxd8 / 100216142 XenbaseID:XB-GENE-920113 Length:231 Species:Xenopus tropicalis


Alignment Length:104 Identity:45/104 - (43%)
Similarity:58/104 - (55%) Gaps:18/104 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTER 85
            |:|.  :..:.||        ..:|.|..:|..|.:|||:||..|.||.|.||||:|..|.||||
 Frog   127 MFPW--MRAQVAP--------GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTER 181

  Fly    86 QVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSED 124
            ||||||||||||.||..::        ...|:|||..::
 Frog   182 QVKIWFQNRRMKWKKENSK--------DKFPVSSQEGKE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeobox 46..99 CDD:278475 34/52 (65%)
hoxd8NP_001135589.1 Homeobox 143..196 CDD:365835 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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