DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and BARX2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_003649.2 Gene:BARX2 / 8538 HGNCID:956 Length:279 Species:Homo sapiens


Alignment Length:251 Identity:64/251 - (25%)
Similarity:102/251 - (40%) Gaps:66/251 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 PSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVG 134
            ||:::..|...:|....:..||.:.:    .|..||::   ::||.|.:|.|...:...      
Human    49 PSLVVRPKPLHSCTGSPSLRAYPLLS----VITRQPTV---ISHLVPATPGIAQALSCH------ 100

  Fly   135 VNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPR 199
               .|...|....|.|   :.....:|..|.|..::||                         ||
Human   101 ---QVTEAVSAEAPGG---EALASSESETEQPTPRQKK-------------------------PR 134

  Fly   200 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTL------ 258
            |.||.:|..||:.|||:|...|||..|.|:::|.||.||:.|||.|:||||||.|:..|      
Human   135 RSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEA 199

  Fly   259 ----------------SKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIP 298
                            .:.:.|:..:|.....:|.:.:...::.|:..|..:.|:|
Human   200 PTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQEELCEAQEPKARDVP 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 31/55 (56%)
BARX2NP_003649.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..137 10/54 (19%)
Homeodomain 134..190 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..279 7/62 (11%)

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