Protein Alignment pb and HB53

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_201471.1
• Gene: HB53 / 836803
• AraportID: AT5G66700
• Length: 228
• Species: Arabidopsis thaliana
• Alignment Length: 193
• Identity: 49/193 - (25%)
• Similarity: 84/193 - (43%)
• Gaps: 33/193 - (17%)

  Fly   151 VVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEK 215
            :|.|...|.:|.|     .:::..|:|..::...:..:.|.   .|:.|:.:  .|:.|:..||.
plant    31 IVNQIDGGEESKP-----VKRRRKRRSKGSSATNEEDVAEI---GGMLRKRK--LTDEQVNMLEY 85

  Fly   216 EFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSK-----TDDEDN--------- 266
            .|.....|...|:.:||..|.|..|||.|||||||.:.|.:.|.:     .:..||
plant    86 SFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLE 150

  Fly   267 KDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSS 329
            ...||..:..|::.|..:|..:..|    ::|.::|:|     :.....||.|:...|.|.::
plant   151 SQILKLTEQLSEAQSEIRKLSERLE----EMPTNSSSS-----SLSVEANNAPTDFELAPETN 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	22/55 (40%)
HB53	NP_201471.1	Homeodomain	71..125	CDD:459649	22/55 (40%)