Protein Alignment pb and HB52

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_200209.1
• Gene: HB52 / 835481
• AraportID: AT5G53980
• Length: 156
• Species: Arabidopsis thaliana
• Alignment Length: 170
• Identity: 47/170 - (27%)
• Similarity: 71/170 - (41%)
• Gaps: 53/170 - (31%)

  Fly   179 NNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVK 243
            |:.:||.|.          .:||    |..|:.:|||.|..||.|....:::::..|.|.:|||.
plant     3 NSQSQGKNK----------KKRL----TQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVA 53

  Fly   244 VWFQNRRMKHKRQTL--------SKTD-----------------DE----DNKDSLKGDDDQSDS 279
            |||||:|.:.|.|:|        ||.:                 ||    .|:.:|..:.|....
plant    54 VWFQNKRARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQDSPVD 118

  Fly   280 NSNSKKSCQGCELPSDD---IPD---STSNSRGHNNNTPS 313
            |||    ...|:...||   :.|   :...|.||.:::.|
plant   119 NSN----LGSCDEDHDDQVVVFDELYACFVSNGHGSSSTS 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	22/55 (40%)
HB52	NP_200209.1	Homeodomain	11..64	CDD:459649	22/66 (33%)