DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and HAT22

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_195493.1 Gene:HAT22 / 829935 AraportID:AT4G37790 Length:278 Species:Arabidopsis thaliana


Alignment Length:217 Identity:61/217 - (28%)
Similarity:93/217 - (42%) Gaps:34/217 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TPN----CDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNV 139
            |||    ..|:|:.|.      :..||...||:.   ..||.||.||.|  |:||...:....:.
plant    20 TPNNYNHAIKKSSSTV------DHRFIRLDPSLT---LSLSGESYKIKT--GAGAGDQICRQTSS 73

  Fly   140 NVGVGVGYPVGVVPQTPD--GMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLR 202
            :.|:. .:..|.|.:..:  |.|...|.....|:....:.|::::.          |.|:..|.:
plant    74 HSGIS-SFSSGRVKREREISGGDGEEEAEETTERVVCSRVSDDHDD----------EEGVSARKK 127

  Fly   203 TAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHK-RQTLSKTDDEDN 266
            ...|..|...||..|..:..|...::..:|..|:|..|||:|||||||.:.| :||  :.|.|..
plant   128 LRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQT--EVDCEFL 190

  Fly   267 KDSLKGDDDQSDSNSNSKKSCQ 288
            |   |..:..:|.|...:|..|
plant   191 K---KCCETLTDENRRLQKELQ 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 21/56 (38%)
HAT22NP_195493.1 Homeodomain 125..179 CDD:459649 20/53 (38%)
HALZ 181..224 CDD:128634 10/34 (29%)

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