Protein Alignment pb and HB40

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001329011.1
• Gene: HB40 / 829827
• AraportID: AT4G36740
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 192
• Identity: 57/192 - (29%)
• Similarity: 79/192 - (41%)
• Gaps: 51/192 - (26%)

  Fly   148 PVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLE 212
            |||.|.|           |..:.|||  |.|..:..|.         |||.|:.:  .|:.|:..
plant    27 PVGEVKQ-----------PKRRRKKT--KGSVASADGG---------NGLFRKRK--LTDEQVNM 67

  Fly   213 LEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQS 277
            ||..|.....|...|:..:||.|.|..|||.|||||||.:.|.:.|   ::|.||  ||
plant    68 LEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRL---EEEYNK--LK------ 121

  Fly   278 DSNSNSKKSCQGCELPSD-------------DIPDSTSNSRGHNNNTPSATNNNPSAGNLTP 326
              ||:.......|.|.|:             :|........|.::|:|.:::.:..| |.||
plant   122 --NSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISSSVSVEA-NETP 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	22/55 (40%)
HB40	NP_001329011.1	HOX	56..109	CDD:197696	22/54 (41%)