Protein Alignment pb and HB-12

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_191748.1
• Gene: HB-12 / 825362
• AraportID: AT3G61890
• Length: 235
• Species: Arabidopsis thaliana
• Alignment Length: 240
• Identity: 46/240 - (19%)
• Similarity: 79/240 - (32%)
• Gaps: 69/240 - (28%)

  Fly   168 MKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIA 232
            |...|...|.|||..:                     ::..|:..||..|.....|...:::::|
plant    18 MTMNKKKMKKSNNQKR---------------------FSEEQIKSLELIFESETRLEPRKKVQVA 61

  Fly   233 ASLDLTERQVKVWFQNRRMKHKRQTLSKTDD----------------EDNKDSLKGDDDQSDSNS 281
            ..|.|..|||.:||||:|.:.|.:.|.|..:                :..|.||..:..:.:...
plant    62 RELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEM 126

  Fly   282 NSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVSA 346
            ...|..:..|...|.....:|::..||             |...|...|:.|
plant   127 QRPKEEKHHECCGDQGLALSSSTESHN-------------GKSEPEGRLDQG------------- 165

  Fly   347 SNVISADSSVASSV-----SLDEDIEESSPIKVKKKDDGQVIKKE 386
             :|:..|....:::     ..:|:.:......|:|.||..:...|
plant   166 -SVLCNDGDYNNNIKTEYFGFEEETDHELMNIVEKADDSCLTSSE 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	16/55 (29%)
HB-12	NP_191748.1	Homeodomain	33..83	CDD:459649	16/70 (23%)
		HALZ	85..126	CDD:460477	5/40 (13%)