DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and ALX1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_008913.2 Gene:ALX1 / 8092 HGNCID:1494 Length:326 Species:Homo sapiens


Alignment Length:239 Identity:60/239 - (25%)
Similarity:95/239 - (39%) Gaps:48/239 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 GMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKY 222
            ||....|...:.:|..|..||:..                 ||.||.:|:.||.||||.|....|
Human   109 GMQEKGELDELGDKCDSNVSSSKK-----------------RRHRTTFTSLQLEELEKVFQKTHY 156

  Fly   223 LCRPRRIEIAASLDLTERQVKVWFQNRRMK-HKRQTLSKTDDEDNKDSLKGDDD---QSDS---- 279
            .....|.::|...:|||.:|:|||||||.| .||:...:.....:..:...|..   ::||    
Human   157 PDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQI 221

  Fly   280 -------NSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSA---TNNNPSAGNLTPNSSLETGI 334
                   |::.......|.||.|  ..|......|:..|.|:   .:|:.:..:..|.::..|  
Human   222 QNNLWAGNASGGSVVTSCMLPRD--TSSCMTPYSHSPRTDSSYTGFSNHQNQFSHVPLNNFFT-- 282

  Fly   335 SSNLMGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKD 378
            .|.|.|:|...|..........:||:::         :::|.|:
Human   283 DSLLTGATNGHAFETKPEFERRSSSIAV---------LRMKAKE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 27/56 (48%)
ALX1NP_008913.2 Homeodomain 133..189 CDD:459649 27/55 (49%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 192..326 24/139 (17%)
OAR 302..320 CDD:461067 4/25 (16%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319 4/21 (19%)

Return to query results.
Submit another query.