Protein Alignment pb and Hoxa6

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001178016.1
• Gene: Hoxa6 / 685732
• RGDID: 1590236
• Length: 233
• Species: Rattus norvegicus
• Alignment Length: 266
• Identity: 83/266 - (31%)
• Similarity: 109/266 - (40%)
• Gaps: 82/266 - (30%)

  Fly    23 LNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMT----PNCD 83
            |.|.....|.:|||                ..:...|...||.    .|||..|:.:    .:|.
  Rat    35 LRPFPASYGASSLP----------------DKTYTSPCFYQQS----NSVLACNRASYEYGASCF 79

  Fly    84 KRSADTAYWMTASEGGFINS-QPSMAEFLNHLSPE---SPKIGTPVGSGAIGGVGVNVNVNVGVG 144
            ....|.:   .||..|  || |....::| |.|||   .|      .|.::.|..::
  Rat    80 YSDKDLS---GASPSG--NSKQRGPGDYL-HFSPEQQYKP------DSSSVQGKALH-------- 124

  Fly   145 VGYPVGVVPQTPDGMD---SVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYT 206
                       .:|.|   :.|.|||| ::..|...:...:.|              ||.|..||
  Rat   125 -----------EEGTDRKYTSPVYPWM-QRMNSCAGAVYGSHG--------------RRGRQTYT 163

  Fly   207 NTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLK 271
            ..|.||||||||||:||.|.||||||.:|.|||||:|:||||||||.|     |.:...|.....
  Rat   164 RYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK-----KENKLINSTQAS 223

  Fly   272 GDDDQS 277
            |:|.::
  Rat   224 GEDSEA 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	47/105 (45%)
		Homeobox	202..254	CDD:278475	38/51 (75%)
Hoxa6	NP_001178016.1	Homeobox	159..212	CDD:395001	39/57 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810